Journal: Journal of Intelligent Information Systems

Article Title: A spiral-like method to place in the space (and interact with) too many values

doi: 10.1007/s10844-021-00677-2

Figure Lengend Snippet: Tree-map visualizations: (l) Squarified Treemap (Bruls et al., ), (m) Stable Treemap (Sondag et al., ), (n) Voronoi Treemap (Balzer et al., ), (o) Bubble-Treemap (Görtler et al., ), (p) Gospermap (Auber et al., )

Article Snippet: Fig. 2 Related radial, spiral and tree-map visualizations: (a) circular drawings of graphs (Six and Tollis, ), (b) dynamic graphs with radial layout (Yee et al., ), (c) exploratory analysis of cyclic multivariate data (Ward & Lipchak, ), (d) clustered bipartite graphs in multi-circular style (Ito et al., ), (e) visual maps for data-intensive ecosystems (Kontogiannopoulou et al., ), (f) snake-spiral visualization (Keim, ), (g) visualization of serial periodic data (Carlis & Konstan, ), (h) tree-maps (Johnson & Shneiderman, ), (i) spiral tree maps (Tu & Shen, ), (k) spiral visualization for time series (Weber et al., ) Fig. 3 Tree-map visualizations: (l) Squarified Treemap (Bruls et al., ), (m) Stable Treemap (Sondag et al., ), (n) Voronoi Treemap (Balzer et al., ), (o) Bubble-Treemap (Görtler et al., ), (p) Gospermap (Auber et al., ) As regards, circle packing , the method described in Wang et al. ( ) groups values in circles, while we use the sectors of a circle.

Techniques:

Journal: bioRxiv

Article Title: Integrin alpha1 beta1 promotes interstitial fibrosis in a mouse model of polycystic kidney disease

doi: 10.1101/2024.10.18.619080

Figure Lengend Snippet: A) Schematic of experimental plan and sample preparation for proteomics analysis. B) Histogram showing proportion and identification of ECM proteins in the datasets for each sample group. C) Principal component analysis for SF and LSF at P1 and P28. D) Voronoi plot showing Panther analyses for top 100 upregulated proteins in the P28 SF. E) Volcano plots showing the Log2 fold change in protein abundance of MatrisomeDB proteins comparing Pkd1 nl/nl (PKD) kidneys to Pkd1 +/+ (Control) kidneys for the SF and LSF at P1 and P28. F) Volcano plots showing the Log2 fold change in protein abundance of focal adhesion proteins comparing Pkd1 nl/nl (PKD) kidneys to Pkd1 +/+ (Control) kidneys for the SF and LSF at P28.

Article Snippet: Voronoi plots were generated in RStudio using logFC and Gene name to determine cell size.

Techniques: Sample Prep, Quantitative Proteomics, Control

Journal: Scientific Reports

Article Title: A neutron tomography study: probing the spontaneous crystallization of randomly packed granular assemblies

doi: 10.1038/s41598-018-36331-1

Figure Lengend Snippet: Histograms of the Voronoi indices (different polyhedra configurations) as a function of frequency for ( a ) 0.2 mm and ( b ) 0.6 mm shaking amplitudes. Only polyhedra with a percentage greater than 1% are shown.

Article Snippet: The OVITO software was used to obtain the radial distribution function, angular distribution function, and to perform the Voronoi tessellation and adaptive – common neighbor analysis (ACNA) .

Techniques:

Journal: Journal of hand therapy : official journal of the American Society of Hand Therapists

Article Title: Ortho-Monitorizer: A portable device for quantitative monitoring of temperature and pressure in a 3D-printed upper limb orthosis.

doi: 10.1016/j.jht.2025.03.002

Figure Lengend Snippet: Fig. 3. Final Design 1. 1 – Voronoi pattern; 2 – Thumb insertion; 3 – Soft edges; 4 – Sensor shape; 5 – Posterior opening.

Article Snippet: The Voronoi Sketch Generator extension of Autodesk Fusion 360 facilitated the creation of the Voronoi pattern, where consistent design rules are applied to achieve a systematic arrangement of openings.

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Journal: Scientific Reports

Article Title: Machine learning-aided analysis for complex local structure of liquid crystal polymers

doi: 10.1038/s41598-019-51238-1

Figure Lengend Snippet: Results of conventional particle-based local structure analyses. ( a ) The centrosymmetry method with 12 neighboring particles. The particle colors gradually change from yellow to light blue with respect to the change in the centrosymmetry parameter from 3 to 4. ( b ) The polyhedral template matching method with a 0.6 root-mean squared cutoff. The yellow color denotes a simple cubic structure, and the blue color represents other structures. ( c ) The Voronoi atomic volume method implemented on Ovito. The particle colors gradually change from yellow to light blue as the volume of the Voronoi cells increases from 3 to 4. ( d ) The Voronoi cell topology visualization and analysis toolkit (VoroTop). The pink color denotes a hexagonal close-packed structure, and the blue color represents other structures. None of the methods could distinguish any local structures of ellipsoidal rigid mesogenic systems.

Article Snippet: The yellow color denotes a simple cubic structure, and the blue color represents other structures. ( c ) The Voronoi atomic volume method implemented on Ovito.

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